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  5. Sevir.5G049900.1

Sevir.5G049900.1


Description : Trypsin family protein with PDZ domain


Gene families : OG_01_0005837 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005837_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G049900.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G049900.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_162
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_13


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036034 PDZ_sf SUPERFAMILY 270 345
IPR001478 PDZ ProSiteProfiles 272 332
IPR009003 Peptidase_S1_PA SUPERFAMILY 73 261
IPR001478 PDZ SMART 270 354
IPR001478 PDZ Pfam 271 335
IPR036034 PDZ_sf Gene3D 271 365
IPR043504 Peptidase_S1_PA_chymotrypsin Gene3D 177 270
IPR043504 Peptidase_S1_PA_chymotrypsin Gene3D 54 160

No CAZYmes available for this sequence

No external refs found!