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  5. LOC_Os10g28040.1

LOC_Os10g28040.1


Description : histone acetyltransferase of the GNAT family 1


Gene families : OG_01_0007191 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007191_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os10g28040.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os10g28040.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_136
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_641


Type GO Term Name Evidence Source
MF GO:0004402 histone acetyltransferase activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
MF GO:0008080 N-acetyltransferase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001487 Bromodomain Pfam 408 490
IPR018359 Bromodomain_CS ProSitePatterns 420 478
IPR001487 Bromodomain PRINTS 467 486
IPR001487 Bromodomain PRINTS 418 431
IPR001487 Bromodomain PRINTS 449 467
IPR001487 Bromodomain PRINTS 432 448
IPR000182 GNAT_dom Pfam 209 286
IPR036427 Bromodomain-like_sf SUPERFAMILY 386 502
IPR036427 Bromodomain-like_sf Gene3D 384 511
IPR000182 GNAT_dom ProSiteProfiles 168 315
IPR001487 Bromodomain SMART 396 505
IPR037800 GCN5 PANTHER 6 505
IPR001487 Bromodomain ProSiteProfiles 415 486
IPR016181 Acyl_CoA_acyltransferase SUPERFAMILY 181 315

No CAZYmes available for this sequence

No external refs found!