LOC_Os10g31850.1

Description : CHY-type/CTCHY-type/RING-type Zinc finger protein

Gene families : OG_01_0003189 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003189_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os10g31850.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os10g31850.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_87
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_186

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR037274	Znf_CHY_sf	SUPERFAMILY	5	80
IPR017921	Znf_CTCHY	ProSiteProfiles	81	145
IPR008913	Znf_CHY	Pfam	10	91
IPR001841	Znf_RING	Pfam	145	188
IPR001841	Znf_RING	SMART	146	188
IPR001841	Znf_RING	ProSiteProfiles	146	189
IPR039512	RCHY1_zinc-ribbon	Pfam	193	251
IPR013083	Znf_RING/FYVE/PHD	Gene3D	139	209
IPR037275	Znf_CTCHY_sf	SUPERFAMILY	82	139
IPR008913	Znf_CHY	ProSiteProfiles	3	79

No CAZYmes available for this sequence

External Links

No external refs found!