LOC_Os10g31970.1

Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein

Gene families : OG_01_0001869 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001869_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os10g31970.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os10g31970.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_297
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_10

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:0140658	ATP-dependent chromatin remodeler activity	ISM	GOs from InterProScan
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR044574	ARIP4-like	PANTHER	79	1471
IPR014001	Helicase_ATP-bd	SMART	711	932
IPR000330	SNF2_N	Pfam	736	1039
IPR001650	Helicase_C	SMART	1146	1243
IPR001650	Helicase_C	Pfam	1119	1243
IPR027417	P-loop_NTPase	SUPERFAMILY	975	1307
IPR038718	SNF2-like_sf	Gene3D	685	969
IPR027417	P-loop_NTPase	Gene3D	980	1320
IPR014001	Helicase_ATP-bd	ProSiteProfiles	737	920
IPR001650	Helicase_C	ProSiteProfiles	1120	1291
IPR027417	P-loop_NTPase	SUPERFAMILY	700	969
IPR025766	ADD	ProSiteProfiles	479	610

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os10g31970.1

Expression Profile

Co-expression Networks

Functional Annotation