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  5. LOC_Os10g32710.1

LOC_Os10g32710.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0011118 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011118_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os10g32710.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os10g32710.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_178
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_101


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt Pfam 331 355
IPR001680 WD40_rpt Pfam 370 402
IPR001680 WD40_rpt Pfam 273 308
IPR001680 WD40_rpt Pfam 173 206
IPR020472 G-protein_beta_WD-40_rep PRINTS 295 309
IPR020472 G-protein_beta_WD-40_rep PRINTS 389 403
IPR020472 G-protein_beta_WD-40_rep PRINTS 343 357
IPR001680 WD40_rpt ProSiteProfiles 331 360
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 157 490
IPR001680 WD40_rpt SMART 265 308
IPR001680 WD40_rpt SMART 363 402
IPR001680 WD40_rpt SMART 323 356
IPR001680 WD40_rpt SMART 167 206
IPR001680 WD40_rpt SMART 216 253
IPR019775 WD40_repeat_CS ProSitePatterns 295 309
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 131 261
IPR001680 WD40_rpt ProSiteProfiles 174 208
IPR001680 WD40_rpt ProSiteProfiles 275 317
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 262 503
IPR001680 WD40_rpt ProSiteProfiles 370 411

No CAZYmes available for this sequence

No external refs found!