Sevir.5G054400.3

Description : purin-rich alpha 1

Gene families : OG_01_0013317 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013317_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G054400.3
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G054400.3
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_149
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_74

Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription cis-regulatory region binding	None	Extended
MF	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	ISM	GOs from InterProScan
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0032422	purine-rich negative regulatory element binding	ISM	GOs from InterProScan
MF	GO:0043565	sequence-specific DNA binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006628	PUR-bd_fam	PANTHER	32	300
IPR006628	PUR-bd_fam	Pfam	233	289
IPR006628	PUR-bd_fam	Pfam	37	165
IPR006628	PUR-bd_fam	SMART	233	294
IPR006628	PUR-bd_fam	SMART	38	99
IPR006628	PUR-bd_fam	SMART	101	168

No CAZYmes available for this sequence

External Links

No external refs found!