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  5. LOC_Os10g34540.1

LOC_Os10g34540.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0002317 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002317_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os10g34540.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os10g34540.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_334
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_126


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 62 183
IPR019734 TPR_repeat ProSiteProfiles 139 172
IPR019734 TPR_repeat ProSiteProfiles 105 138
IPR001440 TPR_1 Pfam 107 138
IPR011990 TPR-like_helical_dom_sf Gene3D 52 197
IPR013105 TPR_2 Pfam 140 172
IPR019734 TPR_repeat SMART 139 172
IPR019734 TPR_repeat SMART 64 97
IPR019734 TPR_repeat SMART 105 138

No CAZYmes available for this sequence

No external refs found!