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  5. LOC_Os10g35070.1

LOC_Os10g35070.1


Description : alpha-galactosidase 1


Gene families : OG_01_0002045 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002045_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os10g35070.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os10g35070.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_80
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_87


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002241 Glyco_hydro_27 PRINTS 154 171
IPR002241 Glyco_hydro_27 PRINTS 267 288
IPR002241 Glyco_hydro_27 PRINTS 246 265
IPR002241 Glyco_hydro_27 PRINTS 78 93
IPR002241 Glyco_hydro_27 PRINTS 181 199
IPR002241 Glyco_hydro_27 PRINTS 41 60
IPR002241 Glyco_hydro_27 PRINTS 119 140
IPR002241 Glyco_hydro_27 CDD 47 311
IPR013780 Glyco_hydro_b Gene3D 314 406
IPR013785 Aldolase_TIM Gene3D 39 313
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 38 311
IPR041233 Melibiase_C Pfam 324 404
IPR000111 Glyco_hydro_27/36_CS ProSitePatterns 83 99
IPR002241 Glyco_hydro_27 PANTHER 23 406
IPR002241 Glyco_hydro_27 Pfam 47 311
HMM Family HMM Length Query Length e-Value Query Start Query End
GH27 229 414 8.2e-93 145 378
No external refs found!