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  5. LOC_Os10g35750.1

LOC_Os10g35750.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0014571 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014571_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os10g35750.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os10g35750.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_176
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_145


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 362 463
IPR002885 Pentatricopeptide_rpt Pfam 185 213
IPR002885 Pentatricopeptide_rpt Pfam 398 424
IPR002885 Pentatricopeptide_rpt Pfam 219 248
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 393 427
IPR011990 TPR-like_helical_dom_sf Gene3D 114 295
IPR011990 TPR-like_helical_dom_sf Gene3D 296 474
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 216 250
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 161 484
IPR002885 Pentatricopeptide_rpt TIGRFAM 397 425
IPR002885 Pentatricopeptide_rpt TIGRFAM 218 252
IPR002885 Pentatricopeptide_rpt TIGRFAM 185 214

No CAZYmes available for this sequence

No external refs found!