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  5. LOC_Os10g37730.1

LOC_Os10g37730.1


Description : XB3 ortholog 3 in Arabidopsis thaliana


Gene families : OG_01_0002277 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002277_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os10g37730.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os10g37730.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_178
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_669


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR017907 Znf_RING_CS ProSitePatterns 342 351
IPR002110 Ankyrin_rpt Pfam 46 98
IPR002110 Ankyrin_rpt Pfam 188 249
IPR002110 Ankyrin_rpt ProSiteProfiles 228 254
IPR013083 Znf_RING/FYVE/PHD Gene3D 314 394
IPR002110 Ankyrin_rpt SMART 228 260
IPR002110 Ankyrin_rpt SMART 185 214
IPR002110 Ankyrin_rpt SMART 111 141
IPR002110 Ankyrin_rpt SMART 44 73
IPR002110 Ankyrin_rpt SMART 77 106
IPR002110 Ankyrin_rpt ProSiteProfiles 77 109
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 15 281
IPR002110 Ankyrin_rpt Pfam 112 132
IPR002110 Ankyrin_rpt ProSiteProfiles 185 217
IPR002110 Ankyrin_rpt ProSiteProfiles 44 76
IPR002110 Ankyrin_rpt ProSiteProfiles 111 132
IPR036770 Ankyrin_rpt-contain_sf Gene3D 6 164
IPR036770 Ankyrin_rpt-contain_sf Gene3D 168 278
IPR001841 Znf_RING ProSiteProfiles 327 377

No CAZYmes available for this sequence

No external refs found!