LOC_Os10g42439.1

Description : DNAJ heat shock N-terminal domain-containing protein

Gene families : OG_01_0004455 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004455_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os10g42439.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os10g42439.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_193
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_34

Type	GO Term	Name	Evidence	Source
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007032	endosome organization	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016050	vesicle organization	None	Extended
BP	GO:0032386	regulation of intracellular transport	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0060341	regulation of cellular localization	None	Extended
BP	GO:0060627	regulation of vesicle-mediated transport	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:2000641	regulation of early endosome to late endosome transport	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR016024	ARM-type_fold	SUPERFAMILY	570	1374
IPR001623	DnaJ_domain	CDD	1589	1629
IPR036869	J_dom_sf	Gene3D	1583	1632
IPR011989	ARM-like	Gene3D	1663	1921
IPR036869	J_dom_sf	SUPERFAMILY	1591	1631
IPR025640	GYF_2	Pfam	1223	1273
IPR001623	DnaJ_domain	ProSiteProfiles	1577	1659
IPR011989	ARM-like	Gene3D	2048	2243
IPR045802	GRV2/DNAJC13_N	Pfam	383	813
IPR045802	GRV2/DNAJC13_N	Pfam	45	333
IPR045802	GRV2/DNAJC13_N	Pfam	953	1052
IPR001623	DnaJ_domain	Pfam	1590	1630
IPR044978	GRV2/DNAJC13	PANTHER	33	2604
IPR016024	ARM-type_fold	SUPERFAMILY	1685	2211
IPR001623	DnaJ_domain	SMART	1552	1634

No CAZYmes available for this sequence

External Links

No external refs found!