LOC_Os11g01140.1

Description : phototropin 1

Gene families : OG_01_0000881 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000881_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os11g01140.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os11g01140.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_169
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_308

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006468	protein phosphorylation	ISM	GOs from InterProScan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000014	PAS	CDD	415	515
IPR017441	Protein_kinase_ATP_BS	ProSitePatterns	600	623
IPR001610	PAC	SMART	477	519
IPR001610	PAC	SMART	200	242
IPR000014	PAS	ProSiteProfiles	400	473
IPR000014	PAS	SMART	402	471
IPR000014	PAS	SMART	125	194
IPR000014	PAS	TIGRFAM	425	521
IPR000014	PAS	TIGRFAM	145	240
IPR011009	Kinase-like_dom_sf	SUPERFAMILY	576	901
IPR000014	PAS	Pfam	144	240
IPR000014	PAS	Pfam	423	518
IPR035965	PAS-like_dom_sf	SUPERFAMILY	416	515
IPR000700	PAS-assoc_C	ProSiteProfiles	197	251
IPR000700	PAS-assoc_C	ProSiteProfiles	474	528
IPR000719	Prot_kinase_dom	ProSiteProfiles	594	881
IPR035965	PAS-like_dom_sf	SUPERFAMILY	144	236
IPR000014	PAS	ProSiteProfiles	123	172
IPR008271	Ser/Thr_kinase_AS	ProSitePatterns	715	727
IPR000014	PAS	CDD	150	239
IPR000719	Prot_kinase_dom	SMART	594	881
IPR000719	Prot_kinase_dom	Pfam	597	881

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os11g01140.1

Expression Profile

Co-expression Networks

Functional Annotation