Sevir.5G061900.1

Description : germin-like protein 5

Gene families : OG_01_0000853 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000853_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G061900.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G061900.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_14
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_18

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0030145	manganese ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006045	Cupin_1	Pfam	68	213
IPR011051	RmlC_Cupin_sf	SUPERFAMILY	31	221
IPR019780	Germin_Mn-BS	ProSitePatterns	109	122
IPR014710	RmlC-like_jellyroll	Gene3D	30	223
IPR006045	Cupin_1	SMART	66	214
IPR001929	Germin	PRINTS	114	134
IPR001929	Germin	PRINTS	144	164
IPR001929	Germin	PRINTS	177	192

No CAZYmes available for this sequence

External Links

No external refs found!