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  5. LOC_Os11g01872.1

LOC_Os11g01872.1


Description : HEAT repeat ;WD domain, G-beta repeat protein protein


Gene families : OG_01_0000662 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000662_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os11g01872.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os11g01872.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_304
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_33


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0031929 TOR signaling ISM GOs from InterProScan
CC GO:0031931 TORC1 complex ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR004083 Raptor PANTHER 1 1216
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 911 1206
IPR011989 ARM-like Gene3D 332 603
IPR001680 WD40_rpt ProSiteProfiles 959 975
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 906 1217
IPR029347 Raptor_N Pfam 4 114
IPR016024 ARM-type_fold SUPERFAMILY 318 734
IPR001680 WD40_rpt SMART 932 976
IPR001680 WD40_rpt SMART 1123 1162
IPR001680 WD40_rpt SMART 1030 1071
IPR001680 WD40_rpt SMART 1172 1211
IPR001680 WD40_rpt SMART 889 929
IPR001680 WD40_rpt SMART 983 1027
IPR029347 Raptor_N SMART 1 115

No CAZYmes available for this sequence

No external refs found!