LOC_Os11g02600.1


Description : Glycosyl hydrolase superfamily protein


Gene families : OG_01_0005894 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005894_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os11g02600.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os11g02600.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_159
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_21


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
BP GO:0071704 organic substance metabolic process ISM GOs from InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Source Start Stop
IPR018087 Glyco_hydro_5_CS ProSitePatterns 173 182
IPR045053 MAN-like PANTHER 5 197
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 11 197
IPR001547 Glyco_hydro_5 Pfam 21 186

No CAZYmes available for this sequence

No external refs found!