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  5. LOC_Os11g03730.3

LOC_Os11g03730.3


Description : alpha-L-arabinofuranosidase 1


Gene families : OG_01_0000348 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000348_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os11g03730.3
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os11g03730.3
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_390
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_134


Type GO Term Name Evidence Source
BP GO:0046373 L-arabinose metabolic process ISM GOs from InterProScan
MF GO:0046556 alpha-L-arabinofuranosidase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR008979 Galactose-bd-like_sf SUPERFAMILY 74 230
IPR010720 Alpha-L-AF_C Pfam 457 641
IPR010720 Alpha-L-AF_C SMART 456 641
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 209 546
IPR013780 Glyco_hydro_b Gene3D 540 648
HMM Family HMM Length Query Length e-Value Query Start Query End
GH51 630 659 1.8e-100 180 649
No external refs found!