1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os11g03890.1

LOC_Os11g03890.1


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0001307 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001307_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os11g03890.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os11g03890.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_342
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_129


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 84 179
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 194 298
IPR035979 RBD_domain_sf SUPERFAMILY 82 171
IPR000504 RRM_dom ProSiteProfiles 209 286
IPR035979 RBD_domain_sf SUPERFAMILY 202 291
IPR000504 RRM_dom SMART 210 282
IPR000504 RRM_dom SMART 93 162
IPR000504 RRM_dom Pfam 95 157
IPR000504 RRM_dom Pfam 213 278

No CAZYmes available for this sequence

No external refs found!