LOC_Os11g04890.1

Description : TRAUCO

Gene families : OG_01_0009380 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009380_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os11g04890.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os11g04890.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_291
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_118

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	None	Extended
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032259	methylation	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0034708	methyltransferase complex	None	Extended
BP	GO:0034968	histone lysine methylation	None	Extended
CC	GO:0035097	histone methyltransferase complex	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0048188	Set1C/COMPASS complex	ISM	GOs from InterProScan
BP	GO:0051568	histone H3-K4 methylation	ISM	GOs from InterProScan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR013320	ConA-like_dom_sf	SUPERFAMILY	170	243
IPR043136	B30.2/SPRY_sf	Gene3D	394	468
IPR043136	B30.2/SPRY_sf	Gene3D	173	292
IPR037353	ASH2	PANTHER	83	487

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os11g04890.1

Expression Profile

Co-expression Networks

Functional Annotation