1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os11g07970.1

LOC_Os11g07970.1


Description : F-box family protein with WD40/YVTN repeat doamin


Gene families : OG_01_0001870 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001870_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os11g07970.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os11g07970.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_285
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_190


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 111 438
IPR036047 F-box-like_dom_sf SUPERFAMILY 33 89
IPR001680 WD40_rpt SMART 233 271
IPR001680 WD40_rpt SMART 190 230
IPR001680 WD40_rpt SMART 112 149
IPR001680 WD40_rpt SMART 318 358
IPR001680 WD40_rpt SMART 399 432
IPR001680 WD40_rpt SMART 274 315
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 116 435
IPR001810 F-box_dom Pfam 38 78

No CAZYmes available for this sequence

No external refs found!