1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os11g08400.1

LOC_Os11g08400.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0052867 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0052867_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os11g08400.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_110


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR020472 G-protein_beta_WD-40_rep PRINTS 644 658
IPR020472 G-protein_beta_WD-40_rep PRINTS 496 510
IPR020472 G-protein_beta_WD-40_rep PRINTS 602 616
IPR001680 WD40_rpt ProSiteProfiles 624 658
IPR040324 WDR44/Dgr2 PANTHER 63 942
IPR019775 WD40_repeat_CS ProSitePatterns 602 616
IPR001680 WD40_rpt SMART 618 657
IPR001680 WD40_rpt SMART 470 509
IPR001680 WD40_rpt SMART 752 793
IPR001680 WD40_rpt SMART 711 751
IPR001680 WD40_rpt SMART 576 615
IPR001680 WD40_rpt SMART 659 698
IPR001680 WD40_rpt Pfam 582 615
IPR001680 WD40_rpt Pfam 621 657
IPR001680 WD40_rpt Pfam 476 508
IPR001680 WD40_rpt Pfam 758 792
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 462 799
IPR001680 WD40_rpt ProSiteProfiles 477 510
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 470 796
IPR001680 WD40_rpt ProSiteProfiles 583 624

No CAZYmes available for this sequence

No external refs found!