LOC_Os11g08660.1

Description : transcription coactivators

Gene families : OG_01_0005169 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005169_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os11g08660.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os11g08660.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_327
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_33

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001357	BRCT_dom	ProSiteProfiles	200	289
IPR001357	BRCT_dom	SMART	572	648
IPR001357	BRCT_dom	SMART	115	192
IPR001357	BRCT_dom	SMART	376	456
IPR001357	BRCT_dom	SMART	668	744
IPR001357	BRCT_dom	SMART	202	279
IPR036420	BRCT_dom_sf	Gene3D	356	466
IPR001357	BRCT_dom	Pfam	376	452
IPR036420	BRCT_dom_sf	SUPERFAMILY	77	203
IPR001357	BRCT_dom	Pfam	208	271
IPR001357	BRCT_dom	Pfam	121	184
IPR001357	BRCT_dom	Pfam	675	736
IPR036420	BRCT_dom_sf	SUPERFAMILY	203	289
IPR036420	BRCT_dom_sf	SUPERFAMILY	367	465
IPR001357	BRCT_dom	ProSiteProfiles	374	466
IPR001357	BRCT_dom	ProSiteProfiles	671	754
IPR036420	BRCT_dom_sf	Gene3D	567	663
IPR036420	BRCT_dom_sf	SUPERFAMILY	667	757
IPR036420	BRCT_dom_sf	SUPERFAMILY	572	660
IPR036420	BRCT_dom_sf	Gene3D	54	112
IPR001357	BRCT_dom	Pfam	572	653
IPR036420	BRCT_dom_sf	Gene3D	205	290
IPR036420	BRCT_dom_sf	Gene3D	672	753
IPR036420	BRCT_dom_sf	Gene3D	115	204
IPR001357	BRCT_dom	ProSiteProfiles	570	658
IPR001357	BRCT_dom	ProSiteProfiles	118	202

No CAZYmes available for this sequence

External Links

No external refs found!