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  5. LOC_Os11g09160.1

LOC_Os11g09160.1


Description : AP2/B3-like transcriptional factor family protein


Gene families : OG_01_0006254 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006254_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os11g09160.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os11g09160.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_52
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_17


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015300 DNA-bd_pseudobarrel_sf Gene3D 275 393
IPR044837 REM16-like PANTHER 201 401
IPR003340 B3_DNA-bd SMART 298 393
IPR003340 B3_DNA-bd SMART 32 123
IPR003340 B3_DNA-bd ProSiteProfiles 30 123
IPR015300 DNA-bd_pseudobarrel_sf SUPERFAMILY 31 127
IPR015300 DNA-bd_pseudobarrel_sf SUPERFAMILY 291 391
IPR044837 REM16-like PANTHER 20 231
IPR003340 B3_DNA-bd CDD 30 120
IPR003340 B3_DNA-bd Pfam 300 391
IPR003340 B3_DNA-bd Pfam 39 120
IPR015300 DNA-bd_pseudobarrel_sf Gene3D 28 124
IPR003340 B3_DNA-bd ProSiteProfiles 298 393
IPR003340 B3_DNA-bd CDD 296 391

No CAZYmes available for this sequence

No external refs found!