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  5. LOC_Os11g29000.1

LOC_Os11g29000.1


Description : NB-ARC domain-containing disease resistance protein


Gene families : OG_01_0000126 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000126_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os11g29000.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os11g29000.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_260
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_182


Type GO Term Name Evidence Source
BP GO:0006952 defense response ISM GOs from InterProScan
MF GO:0043531 ADP binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR044974 Disease_R_plants PANTHER 559 761
IPR003591 Leu-rich_rpt_typical-subtyp SMART 253 276
IPR003591 Leu-rich_rpt_typical-subtyp SMART 300 323
IPR003591 Leu-rich_rpt_typical-subtyp SMART 601 624
IPR002182 NB-ARC Pfam 7 53
IPR042197 Apaf_helical Gene3D 1 71
IPR027417 P-loop_NTPase SUPERFAMILY 5 85
IPR036388 WH-like_DNA-bd_sf Gene3D 72 161
IPR032675 LRR_dom_sf Gene3D 558 751
IPR044974 Disease_R_plants PANTHER 8 472
IPR032675 LRR_dom_sf Gene3D 192 495

No CAZYmes available for this sequence

No external refs found!