LOC_Os11g29400.1

Description : 6-phosphogluconate dehydrogenase family protein

Gene families : OG_01_0016153 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0016153_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os11g29400.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os11g29400.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_69
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_22

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006098	pentose-phosphate shunt	ISM	GOs from InterProScan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006739	NADP metabolic process	None	Extended
BP	GO:0006740	NADPH regeneration	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	ISM	GOs from InterProScan
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019362	pyridine nucleotide metabolic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046496	nicotinamide nucleotide metabolic process	None	Extended
MF	GO:0050661	NADP binding	ISM	GOs from InterProScan
BP	GO:0051156	glucose 6-phosphate metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072524	pyridine-containing compound metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006114	6PGDH_C	Pfam	199	496
IPR006183	Pgluconate_DH	PRINTS	87	116
IPR006183	Pgluconate_DH	PRINTS	22	45
IPR006183	Pgluconate_DH	PRINTS	386	408
IPR006183	Pgluconate_DH	PRINTS	140	165
IPR006183	Pgluconate_DH	PRINTS	188	216
IPR006183	Pgluconate_DH	PRINTS	273	300
IPR006183	Pgluconate_DH	PANTHER	1	508
IPR036291	NAD(P)-bd_dom_sf	SUPERFAMILY	23	196
IPR006113	6PGDH_Gnd/GntZ	PIRSF	18	504
IPR013328	6PGD_dom2	Gene3D	201	464
IPR006114	6PGDH_C	SMART	199	497
IPR006113	6PGDH_Gnd/GntZ	TIGRFAM	24	497
IPR008927	6-PGluconate_DH-like_C_sf	SUPERFAMILY	197	498
IPR006115	6PGDH_NADP-bd	Pfam	23	191

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os11g29400.1

Expression Profile

Co-expression Networks

Functional Annotation