LOC_Os11g36790.1

Description : BED zinc finger ;hAT family dimerisation domain

Gene families : OG_01_0001514 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001514_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os11g36790.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os11g36790.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_110
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_55

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0046983	protein dimerization activity	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036047	F-box-like_dom_sf	SUPERFAMILY	713	747
IPR003656	Znf_BED	ProSiteProfiles	79	127
IPR005174	DUF295	Pfam	1027	1084
IPR001810	F-box_dom	ProSiteProfiles	711	747
IPR001810	F-box_dom	Pfam	714	746
IPR008906	HATC_C_dom	Pfam	483	535
IPR036236	Znf_C2H2_sf	SUPERFAMILY	82	141
IPR012337	RNaseH-like_sf	SUPERFAMILY	230	534

No CAZYmes available for this sequence

External Links

No external refs found!