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  5. Sevir.5G085500.1

Sevir.5G085500.1


Description : endonuclease 2


Gene families : OG_01_0005220 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005220_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G085500.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G085500.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_28
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_555


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0004519 endonuclease activity ISM GOs from InterProScan
BP GO:0006308 DNA catabolic process ISM GOs from InterProScan
MF GO:0016788 hydrolase activity, acting on ester bonds ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR003154 S1/P1nuclease CDD 26 287
IPR008947 PLipase_C/P1_nuclease_dom_sf SUPERFAMILY 26 286
IPR003154 S1/P1nuclease Pfam 26 287
IPR003154 S1/P1nuclease PANTHER 7 288
IPR008947 PLipase_C/P1_nuclease_dom_sf Gene3D 26 288

No CAZYmes available for this sequence

No external refs found!