1. Home
  2. Species
  3. Setaria viridis
  4. Sequence
  5. Sevir.5G085600.1

Sevir.5G085600.1


Description : endonuclease 2


Gene families : OG_01_0005220 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005220_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G085600.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G085600.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_147
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_111


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0004519 endonuclease activity ISM GOs from InterProScan
BP GO:0006308 DNA catabolic process ISM GOs from InterProScan
MF GO:0016788 hydrolase activity, acting on ester bonds ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR003154 S1/P1nuclease CDD 31 289
IPR008947 PLipase_C/P1_nuclease_dom_sf Gene3D 31 294
IPR003154 S1/P1nuclease PANTHER 2 302
IPR003154 S1/P1nuclease Pfam 31 290
IPR008947 PLipase_C/P1_nuclease_dom_sf SUPERFAMILY 31 288

No CAZYmes available for this sequence

No external refs found!