LOC_Os11g42910.1

Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein

Gene families : OG_01_0063909 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0063909_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os11g42910.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_125

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	ISM	GOs from InterProScan
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR038765	Papain-like_cys_pep_sf	SUPERFAMILY	1028	1254
IPR041679	DNA2/NAM7-like_C	Pfam	788	967
IPR041679	DNA2/NAM7-like_C	CDD	808	966
IPR045055	DNA2/NAM7-like	PANTHER	1064	1261
IPR045055	DNA2/NAM7-like	PANTHER	1	1033
IPR027417	P-loop_NTPase	Gene3D	805	996
IPR027417	P-loop_NTPase	SUPERFAMILY	440	970
IPR041677	DNA2/NAM7_AAA_11	Pfam	684	774
IPR041677	DNA2/NAM7_AAA_11	Pfam	443	501
IPR027417	P-loop_NTPase	Gene3D	391	625
IPR027417	P-loop_NTPase	Gene3D	631	804

No CAZYmes available for this sequence

External Links

No external refs found!