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  5. Sevir.5G086900.1

Sevir.5G086900.1


Description : Cation efflux family protein


Gene families : OG_01_0007454 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007454_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G086900.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G086900.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_28
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_12


Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport ISM GOs from InterProScan
MF GO:0008324 monoatomic cation transmembrane transporter activity ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036837 Cation_efflux_CTD_sf SUPERFAMILY 301 378
IPR027469 Cation_efflux_TMD_sf SUPERFAMILY 100 299
IPR002524 Cation_efflux Pfam 108 297
IPR027469 Cation_efflux_TMD_sf Gene3D 104 297
IPR027470 Cation_efflux_CTD Pfam 307 378
IPR036837 Cation_efflux_CTD_sf Gene3D 303 379
IPR002524 Cation_efflux TIGRFAM 107 378

No CAZYmes available for this sequence

No external refs found!