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  5. Sevir.5G087100.1

Sevir.5G087100.1


Description : alpha-xylosidase 1


Gene families : OG_01_0000783 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000783_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G087100.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G087100.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_57
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_25


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
MF GO:0030246 carbohydrate binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013780 Glyco_hydro_b Gene3D 758 926
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 279 672
IPR030458 Glyco_hydro_31_AS ProSitePatterns 441 448
IPR025887 Glyco_hydro_31_N_dom Pfam 180 248
IPR011013 Gal_mutarotase_sf_dom SUPERFAMILY 39 276
IPR000322 Glyco_hydro_31_TIM Pfam 269 761
IPR013780 Glyco_hydro_b Gene3D 657 757
HMM Family HMM Length Query Length e-Value Query Start Query End
GH31 427 928 1.8e-153 268 761
No external refs found!