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  5. LOC_Os11g45560.1

LOC_Os11g45560.1


Description : BTB-POZ and MATH domain 1


Gene families : OG_01_0153298 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): No tree available for this family

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os11g45560.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os11g45560.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_121
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_257


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0016567 protein ubiquitination ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002083 MATH/TRAF_dom CDD 35 174
IPR045005 BPM1-6 PANTHER 19 319
IPR000210 BTB/POZ_dom Pfam 202 318
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 186 319
IPR002083 MATH/TRAF_dom ProSiteProfiles 34 173
IPR008974 TRAF-like Gene3D 34 175
IPR011333 SKP1/BTB/POZ_sf Gene3D 176 346
IPR000210 BTB/POZ_dom SMART 208 322
IPR000210 BTB/POZ_dom ProSiteProfiles 208 287

No CAZYmes available for this sequence

No external refs found!