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Description : RNI-like superfamily protein
Gene families : OG_01_0000341 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000341_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os12g01760.1 | |
| Neighborhood | Oryza sativa coexpression network - Wang et al (2014): LOC_Os12g01760.1 | |
| Cluster | Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_268 | |
| Cluster | Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_122 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR032675 | LRR_dom_sf | Gene3D | 305 | 386 |
| IPR032675 | LRR_dom_sf | Gene3D | 229 | 304 |
| IPR032675 | LRR_dom_sf | Gene3D | 405 | 648 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 263 | 288 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 417 | 440 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 520 | 543 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 84 | 109 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 493 | 518 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 391 | 416 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 236 | 261 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 365 | 390 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 186 | 211 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 289 | 317 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 467 | 492 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 339 | 364 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 544 | 569 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 160 | 185 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 570 | 594 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 441 | 466 |
| IPR001611 | Leu-rich_rpt | Pfam | 570 | 592 |
| IPR001611 | Leu-rich_rpt | Pfam | 417 | 439 |
| IPR001611 | Leu-rich_rpt | Pfam | 367 | 387 |
| IPR032675 | LRR_dom_sf | Gene3D | 149 | 228 |
| IPR032675 | LRR_dom_sf | Gene3D | 75 | 148 |
No CAZYmes available for this sequence
| No external refs found! |