LOC_Os12g07740.1

Description : eukaryotic translation initiation factor 2 gamma subunit

Gene families : OG_01_0004702 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004702_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os12g07740.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os12g07740.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_233
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_164

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	ISM	GOs from InterProScan
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISM	GOs from InterProScan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000795	T_Tr_GTP-bd_dom	ProSiteProfiles	30	239
IPR044127	eIF2g_dom_2	CDD	241	354
IPR009001	Transl_elong_EF1A/Init_IF2_C	SUPERFAMILY	355	452
IPR044128	eIF2g_GTP-bd	CDD	33	240
IPR004161	EFTu-like_2	Pfam	268	350
IPR000795	T_Tr_GTP-bd_dom	PRINTS	34	47
IPR000795	T_Tr_GTP-bd_dom	PRINTS	139	150
IPR000795	T_Tr_GTP-bd_dom	PRINTS	177	186
IPR000795	T_Tr_GTP-bd_dom	PRINTS	123	133
IPR027417	P-loop_NTPase	Gene3D	30	240
IPR000795	T_Tr_GTP-bd_dom	Pfam	32	236
IPR009000	Transl_B-barrel_sf	SUPERFAMILY	240	354
IPR027417	P-loop_NTPase	SUPERFAMILY	23	246
IPR015256	eIF2g_C	Pfam	362	451
IPR015256	eIF2g_C	CDD	357	451

No CAZYmes available for this sequence

External Links

No external refs found!