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  5. LOC_Os12g07820.1

LOC_Os12g07820.1


Description : stromal ascorbate peroxidase


Gene families : OG_01_0000305 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000305_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os12g07820.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os12g07820.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_164
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_229


Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity ISM GOs from InterProScan
BP GO:0006979 response to oxidative stress ISM GOs from InterProScan
MF GO:0020037 heme binding ISM GOs from InterProScan
BP GO:0034599 cellular response to oxidative stress ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019793 Peroxidases_heam-ligand_BS ProSitePatterns 190 200
IPR002016 Haem_peroxidase PRINTS 140 152
IPR002016 Haem_peroxidase PRINTS 122 139
IPR002016 Haem_peroxidase PRINTS 60 74
IPR002016 Haem_peroxidase PRINTS 190 205
IPR002016 Haem_peroxidase PRINTS 230 245
IPR002016 Haem_peroxidase Pfam 47 278
IPR002207 Peroxidase_I PRINTS 184 205
IPR002207 Peroxidase_I PRINTS 39 59
IPR002207 Peroxidase_I PRINTS 259 283
IPR002207 Peroxidase_I PRINTS 60 75
IPR002016 Haem_peroxidase ProSiteProfiles 122 309
IPR044831 Ccp1-like PANTHER 13 306
IPR010255 Haem_peroxidase_sf SUPERFAMILY 47 303
HMM Family HMM Length Query Length e-Value Query Start Query End
AA2 255 310 5.1e-53 50 298
No external refs found!