LOC_Os12g17900.1

Description : ARM repeat superfamily protein

Gene families : OG_01_0011362 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011362_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os12g17900.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os12g17900.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_193
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_34

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003613	Ubox_domain	Pfam	23	97
IPR003613	Ubox_domain	SMART	24	92
IPR003613	Ubox_domain	ProSiteProfiles	20	99
IPR000225	Armadillo	SMART	580	622
IPR000225	Armadillo	SMART	663	704
IPR000225	Armadillo	SMART	258	298
IPR000225	Armadillo	SMART	299	338
IPR000225	Armadillo	SMART	339	384
IPR000225	Armadillo	SMART	131	171
IPR000225	Armadillo	SMART	708	750
IPR000225	Armadillo	SMART	173	213
IPR011989	ARM-like	Gene3D	105	306
IPR013083	Znf_RING/FYVE/PHD	Gene3D	10	104
IPR045210	RING-Ubox_PUB	CDD	25	72
IPR016024	ARM-type_fold	SUPERFAMILY	398	790
IPR011989	ARM-like	Gene3D	307	478
IPR016024	ARM-type_fold	SUPERFAMILY	105	483
IPR011989	ARM-like	Gene3D	566	795

No CAZYmes available for this sequence

External Links

No external refs found!