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  5. LOC_Os12g18120.1

LOC_Os12g18120.1


Description : Zinc finger C-x8-C-x5-C-x3-H type family protein


Gene families : OG_01_0005512 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005512_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os12g18120.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os12g18120.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_377
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_198


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000571 Znf_CCCH ProSiteProfiles 237 265
IPR036855 Znf_CCCH_sf SUPERFAMILY 478 505
IPR000571 Znf_CCCH Pfam 240 262
IPR000571 Znf_CCCH Pfam 287 311
IPR000571 Znf_CCCH Pfam 110 134
IPR000571 Znf_CCCH Pfam 479 504
IPR000571 Znf_CCCH ProSiteProfiles 477 505
IPR036855 Znf_CCCH_sf SUPERFAMILY 288 312
IPR000571 Znf_CCCH ProSiteProfiles 108 136
IPR000571 Znf_CCCH SMART 108 135
IPR000571 Znf_CCCH SMART 433 460
IPR000571 Znf_CCCH SMART 238 264
IPR000571 Znf_CCCH SMART 477 504
IPR000571 Znf_CCCH SMART 285 312
IPR000571 Znf_CCCH ProSiteProfiles 285 313
IPR000571 Znf_CCCH ProSiteProfiles 433 461

No CAZYmes available for this sequence

No external refs found!