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  5. LOC_Os12g19549.1

LOC_Os12g19549.1


Description : telomerase reverse transcriptase


Gene families : OG_01_0014253 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014253_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os12g19549.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os12g19549.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_304
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_210


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
MF GO:0003721 telomerase RNA reverse transcriptase activity ISM GOs from InterProScan
MF GO:0003964 RNA-directed DNA polymerase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR021891 Telomerase_RBD SMART 588 735
IPR003545 Telomerase_RT PRINTS 702 716
IPR003545 Telomerase_RT PRINTS 993 1005
IPR003545 Telomerase_RT PRINTS 829 845
IPR003545 Telomerase_RT PANTHER 14 1258
IPR000477 RT_dom Pfam 936 1038
IPR043502 DNA/RNA_pol_sf SUPERFAMILY 945 1165
IPR000477 RT_dom ProSiteProfiles 742 1067
IPR021891 Telomerase_RBD Pfam 589 733

No CAZYmes available for this sequence

No external refs found!