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  5. LOC_Os12g21700.1

LOC_Os12g21700.1


Description : zinc finger protein 1


Gene families : OG_01_0012060 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012060_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os12g21700.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os12g21700.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_299
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_140


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036855 Znf_CCCH_sf SUPERFAMILY 368 393
IPR000571 Znf_CCCH Pfam 69 93
IPR000571 Znf_CCCH Pfam 160 184
IPR000571 Znf_CCCH Pfam 320 345
IPR000571 Znf_CCCH Pfam 366 391
IPR000571 Znf_CCCH Pfam 114 138
IPR000571 Znf_CCCH ProSiteProfiles 157 185
IPR000571 Znf_CCCH ProSiteProfiles 66 94
IPR000571 Znf_CCCH ProSiteProfiles 111 139
IPR000571 Znf_CCCH ProSiteProfiles 318 346
IPR000571 Znf_CCCH ProSiteProfiles 364 392
IPR036855 Znf_CCCH_sf SUPERFAMILY 321 348
IPR000571 Znf_CCCH SMART 66 93
IPR000571 Znf_CCCH SMART 364 391
IPR000571 Znf_CCCH SMART 111 138
IPR000571 Znf_CCCH SMART 157 184
IPR000571 Znf_CCCH SMART 318 345
IPR036855 Znf_CCCH_sf SUPERFAMILY 113 140
IPR036855 Znf_CCCH_sf SUPERFAMILY 156 185
IPR036855 Znf_CCCH_sf SUPERFAMILY 70 94

No CAZYmes available for this sequence

No external refs found!