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  5. LOC_Os12g33090.1

LOC_Os12g33090.1


Description : CCCH-type zinc finger protein with ARM repeat domain


Gene families : OG_01_0012638 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012638_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os12g33090.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os12g33090.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_293
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_86


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 50 127
IPR045234 Unkempt-like PANTHER 151 617
IPR002110 Ankyrin_rpt Pfam 91 122
IPR000571 Znf_CCCH ProSiteProfiles 218 241
IPR036770 Ankyrin_rpt-contain_sf Gene3D 11 135
IPR045234 Unkempt-like PANTHER 11 150
IPR002110 Ankyrin_rpt ProSiteProfiles 88 123
IPR000571 Znf_CCCH SMART 249 272
IPR000571 Znf_CCCH SMART 213 240

No CAZYmes available for this sequence

No external refs found!