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Description : lipoxygenase 2
Gene families : OG_01_0033388 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0033388_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os12g37260.1 | |
| Neighborhood | Oryza sativa coexpression network - Wang et al (2014): LOC_Os12g37260.1 | |
| Cluster | Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_138 | |
| Cluster | Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_135 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| MF | GO:0016491 | oxidoreductase activity | ISM | GOs from InterProScan |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | ISM | GOs from InterProScan |
| MF | GO:0046872 | metal ion binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR000907 | LipOase | PANTHER | 63 | 921 |
| IPR013819 | LipOase_C | ProSiteProfiles | 205 | 922 |
| IPR001246 | LipOase_plant | PRINTS | 440 | 459 |
| IPR001246 | LipOase_plant | PRINTS | 508 | 532 |
| IPR001246 | LipOase_plant | PRINTS | 399 | 415 |
| IPR001246 | LipOase_plant | PRINTS | 174 | 192 |
| IPR001246 | LipOase_plant | PRINTS | 237 | 253 |
| IPR001246 | LipOase_plant | PRINTS | 269 | 288 |
| IPR001246 | LipOase_plant | PRINTS | 198 | 219 |
| IPR001246 | LipOase_plant | PRINTS | 830 | 844 |
| IPR013819 | LipOase_C | PRINTS | 553 | 570 |
| IPR013819 | LipOase_C | PRINTS | 591 | 611 |
| IPR013819 | LipOase_C | PRINTS | 571 | 588 |
| IPR036226 | LipOase_C_sf | SUPERFAMILY | 207 | 922 |
| IPR013819 | LipOase_C | Pfam | 215 | 900 |
| IPR036392 | PLAT/LH2_dom_sf | SUPERFAMILY | 60 | 206 |
| IPR001024 | PLAT/LH2_dom | SMART | 76 | 203 |
| IPR020834 | LipOase_CS | ProSitePatterns | 598 | 608 |
| IPR020833 | LipOase_Fe_BS | ProSitePatterns | 571 | 585 |
| IPR027433 | Lipoxygenase_dom_3 | Gene3D | 328 | 430 |
No CAZYmes available for this sequence
| No external refs found! |