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  5. LOC_Os12g37780.1

LOC_Os12g37780.1


Description : tetratricopeptide repeat (TPR)-containing protein


Gene families : OG_01_0006910 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006910_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os12g37780.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os12g37780.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_388
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_383


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR043376 NPG1-like PANTHER 37 726
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 440 711
IPR011990 TPR-like_helical_dom_sf Gene3D 572 719
IPR019734 TPR_repeat SMART 335 368
IPR019734 TPR_repeat SMART 685 718
IPR019734 TPR_repeat SMART 456 489
IPR019734 TPR_repeat SMART 581 614
IPR019734 TPR_repeat SMART 615 648
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 213 477
IPR011990 TPR-like_helical_dom_sf Gene3D 36 239
IPR011990 TPR-like_helical_dom_sf Gene3D 270 571

No CAZYmes available for this sequence

No external refs found!