LOC_Os12g38620.1

Description : TBP-associated factor 8

Gene families : OG_01_0002923 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002923_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os12g38620.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os12g38620.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_14
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_228

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005667	transcription regulator complex	None	Extended
CC	GO:0005669	transcription factor TFIID complex	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0046982	protein heterodimerization activity	ISM	GOs from InterProScan
MF	GO:0046983	protein dimerization activity	None	Extended
CC	GO:0090575	RNA polymerase II transcription regulator complex	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR019473	TFIID_su8_C	Pfam	158	206
IPR006565	BTP	SMART	19	95
IPR037818	TAF8	PANTHER	9	366
IPR019473	TFIID_su8_C	CDD	158	210
IPR009072	Histone-fold	Gene3D	15	108
IPR006565	BTP	Pfam	20	91

No CAZYmes available for this sequence

External Links

No external refs found!