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  5. LOC_Os12g39180.1

LOC_Os12g39180.1


Description : NRAMP metal ion transporter 2


Gene families : OG_01_0001438 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001438_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os12g39180.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os12g39180.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_200
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_189


Type GO Term Name Evidence Source
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0030001 metal ion transport ISM GOs from InterProScan
MF GO:0046873 metal ion transmembrane transporter activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001046 NRAMP_fam Hamap 73 494
IPR001046 NRAMP_fam Pfam 108 468
IPR001046 NRAMP_fam PRINTS 166 192
IPR001046 NRAMP_fam PRINTS 221 242
IPR001046 NRAMP_fam PRINTS 405 422
IPR001046 NRAMP_fam PRINTS 438 457
IPR001046 NRAMP_fam PRINTS 270 293
IPR001046 NRAMP_fam PRINTS 377 396
IPR001046 NRAMP_fam PRINTS 196 215
IPR001046 NRAMP_fam PANTHER 21 538
IPR001046 NRAMP_fam TIGRFAM 85 462

No CAZYmes available for this sequence

No external refs found!