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  5. LOC_Os12g40490.1

LOC_Os12g40490.1


Description : LIM domain-containing protein


Gene families : OG_01_0005270 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005270_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os12g40490.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os12g40490.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_268
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_134


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001781 Znf_LIM ProSitePatterns 119 153
IPR022087 DA1-like_dom Pfam 268 481
IPR045218 DA1-like PANTHER 1 486
IPR001781 Znf_LIM SMART 118 170
IPR003903 UIM_dom ProSiteProfiles 70 89
IPR001781 Znf_LIM Pfam 119 173
IPR003903 UIM_dom ProSiteProfiles 40 59
IPR001781 Znf_LIM ProSiteProfiles 117 177
IPR003903 UIM_dom SMART 70 89
IPR003903 UIM_dom SMART 40 59

No CAZYmes available for this sequence

No external refs found!