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  5. LOC_Os12g40520.1

LOC_Os12g40520.1


Description : TRAF-like superfamily protein


Gene families : OG_01_0010976 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010976_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os12g40520.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os12g40520.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_193
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_34


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR008974 TRAF-like Gene3D 55 198
IPR002083 MATH/TRAF_dom ProSiteProfiles 69 191
IPR002083 MATH/TRAF_dom CDD 70 192
IPR002083 MATH/TRAF_dom SMART 71 175
IPR002083 MATH/TRAF_dom Pfam 76 193

No CAZYmes available for this sequence

No external refs found!