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  5. LOC_Os12g40560.1

LOC_Os12g40560.1


Description : RNA-binding KH domain-containing protein


Gene families : OG_01_0003773 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003773_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os12g40560.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os12g40560.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_14
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_165


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036612 KH_dom_type_1_sf SUPERFAMILY 108 167
IPR036612 KH_dom_type_1_sf SUPERFAMILY 208 287
IPR036612 KH_dom_type_1_sf Gene3D 377 461
IPR004088 KH_dom_type_1 Pfam 117 167
IPR004088 KH_dom_type_1 Pfam 209 274
IPR004088 KH_dom_type_1 Pfam 391 452
IPR036612 KH_dom_type_1_sf SUPERFAMILY 386 475
IPR004087 KH_dom SMART 388 456
IPR004087 KH_dom SMART 113 186
IPR004087 KH_dom SMART 205 278

No CAZYmes available for this sequence

No external refs found!