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Description : ankyrin repeat family protein
Gene families : OG_01_0000710 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000710_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os12g40780.1 | |
| Neighborhood | Oryza sativa coexpression network - Wang et al (2014): LOC_Os12g40780.1 | |
| Cluster | Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_84 | |
| Cluster | Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_204 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR002110 | Ankyrin_rpt | Pfam | 104 | 165 |
| IPR002110 | Ankyrin_rpt | Pfam | 11 | 98 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 265 | 381 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 37 | 70 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 71 | 103 |
| IPR036770 | Ankyrin_rpt-contain_sf | Gene3D | 2 | 101 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 267 | 379 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 169 | 201 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 336 | 369 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 136 | 168 |
| IPR002110 | Ankyrin_rpt | SMART | 104 | 135 |
| IPR002110 | Ankyrin_rpt | SMART | 209 | 238 |
| IPR002110 | Ankyrin_rpt | SMART | 71 | 100 |
| IPR002110 | Ankyrin_rpt | SMART | 136 | 165 |
| IPR002110 | Ankyrin_rpt | SMART | 37 | 67 |
| IPR002110 | Ankyrin_rpt | SMART | 169 | 198 |
| IPR013105 | TPR_2 | Pfam | 337 | 367 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 104 | 136 |
| IPR036770 | Ankyrin_rpt-contain_sf | Gene3D | 102 | 238 |
| IPR002110 | Ankyrin_rpt | Pfam | 171 | 197 |
| IPR036770 | Ankyrin_rpt-contain_sf | SUPERFAMILY | 11 | 231 |
| IPR002110 | Ankyrin_rpt | PRINTS | 105 | 120 |
| IPR002110 | Ankyrin_rpt | PRINTS | 185 | 199 |
| IPR019734 | TPR_repeat | SMART | 336 | 369 |
| IPR019734 | TPR_repeat | SMART | 268 | 301 |
| IPR019734 | TPR_repeat | SMART | 302 | 335 |
No CAZYmes available for this sequence
| No external refs found! |