LOC_Os12g41170.1

Description : Root hair defective 3 GTP-binding protein (RHD3)

Gene families : OG_01_0020855 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0020855_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os12g41170.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os12g41170.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_240
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_64

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR008803	RHD3/Sey1	PANTHER	2	853
IPR008803	RHD3/Sey1	Hamap	9	761
IPR008803	RHD3/Sey1	Pfam	46	780
IPR027417	P-loop_NTPase	SUPERFAMILY	8	248
IPR027417	P-loop_NTPase	Gene3D	21	245
IPR030386	G_GB1_RHD3_dom	ProSiteProfiles	37	252

No CAZYmes available for this sequence

External Links

No external refs found!