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  5. LOC_Os12g41290.1

LOC_Os12g41290.1


Description : Spc97 / Spc98 family of spindle pole body (SBP) component


Gene families : OG_01_0000904 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000904_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os12g41290.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os12g41290.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_269
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_56


Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization ISM GOs from InterProScan
CC GO:0000922 spindle pole ISM GOs from InterProScan
CC GO:0005815 microtubule organizing center ISM GOs from InterProScan
BP GO:0007020 microtubule nucleation ISM GOs from InterProScan
MF GO:0043015 gamma-tubulin binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR040457 GCP_C Pfam 729 1039
IPR007259 GCP PANTHER 57 159
IPR007259 GCP PANTHER 159 1054
IPR041470 GCP_N Pfam 172 392
IPR042241 GCP_C_sf Gene3D 729 1038

No CAZYmes available for this sequence

No external refs found!