1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os12g42140.1

LOC_Os12g42140.1


Description : GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain


Gene families : OG_01_0013847 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013847_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os12g42140.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os12g42140.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_14
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_201


Type GO Term Name Evidence Source
BP GO:0000390 spliceosomal complex disassembly ISM GOs from InterProScan
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR024933 TFP11 PIRSF 2 841
IPR045211 TFP11/STIP/Ntr1 PANTHER 8 834
IPR000467 G_patch_dom Pfam 184 224
IPR022783 GCFC_dom Pfam 400 670
IPR000467 G_patch_dom SMART 180 226
IPR022159 STIP/TFIP11_N Pfam 7 99
IPR000467 G_patch_dom ProSiteProfiles 182 228

No CAZYmes available for this sequence

No external refs found!